PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022934167.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 257aa    MW: 28806.5 Da    PI: 6.7342
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022934167.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.000176284123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_022934167.1 62 YSCSFCRREFRSAQALGGHMNVH 84
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MWRKQQEERQ THDCDDSVDS QSSKTKTKTP FGYEDPFSWE EQAFAEDAAG GLGGCVWPPR  60
SYSCSFCRRE FRSAQALGGH MNVHRRDRAR LKQSPNTPNH NPFTNSFPFQ SPSSSTFSYH  120
LPTPKPYLVH PPPPNRLTSK AGKDENLTNS CSRVRDNDHV GIGILDDGLN FSFGPPWPAS  180
GLFDDDGGRE EAGTDTSCKK RKTDDETSSI QLYVKSNNSV ENHHHRRRRG DPIESEVIGV  240
SSSPFHDLDL ELRLGGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.11e-26C2H2 family protein