PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022934001.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 268aa    MW: 30476.2 Da    PI: 7.0361
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022934001.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.5e-2088137255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrd +     r +r++lg+++t+eeAa  +++a+ +l+g
  XP_022934001.1  88 KFRGVRRRP-WGKWAAEIRDpF-----RrTRVWLGTYDTPEEAAVVYDQAAVRLKG 137
                     89*******.**********66.....45************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MGRVCSGGIR FREIRTTTHK SATETKLVRI SFTDGDATDS SSGEDEEPIS IRHVKRHVTE  60
IRLLTRSSKK SSLKSGAEPL RNSKSYRKFR GVRRRPWGKW AAEIRDPFRR TRVWLGTYDT  120
PEEAAVVYDQ AAVRLKGPNA LTNFAEAPIS KSTVTTLLTP PPLAVAVAVA ISDREESRCL  180
CSPTSVLRLE EQIWRPIEHV NEESALEMEL NWLYDRNSNS LLFNSRTPQP INSDEVEDFG  240
DIPMDFESCK WDVENYFQDP TFSISLTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-37ERF family protein