PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022933936.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 345aa MW: 39109.4 Da PI: 8.1402

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022933936.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.3	1e-55	17	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kv ++ +++ ++i +vd++k+ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat+sgyWkatgkdk++++ XP_022933936.1 17 LPPGFRFHPTDEELISHYLFDKVMNSAFSC-RAIGDVDLNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATESGYWKATGKDKDIYR- 109 79**************************.89***********888999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfy+grapkgek+dWvmheyrle XP_022933936.1 110 GKSLVGMKKTLVFYRGRAPKGEKSDWVMHEYRLE 143 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MAGHGVSVVN EEHHLELPPG FRFHPTDEEL ISHYLFDKVM NSAFSCRAIG DVDLNKSEPW 60 DLPWKAKMGE KEWYFFCVRD RKYPTGLRTN RATESGYWKA TGKDKDIYRG KSLVGMKKTL 120 VFYRGRAPKG EKSDWVMHEY RLEGKLSALN LPKTAKNEWV ICRVFQKNAN GKKVDISGIS 180 KFGHSILPPL TDSSPFKGEI KRDVQTVSNV PCFSTAMDSQ RKLEPMASLS SSSSYPVIPN 240 PQTNSVYSAP NLQFPDCVLL QEQQSLLRTL LQTVNGGNPR EPFKTERDKI SCISQETCLT 300 TDINNEISSV FPNLEMGRRL FDNSQEAPPC SMAPFDLDGF WNYCN

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MAGHGVSVVN EEHHLELPPG FRFHPTDEEL ISHYLFDKVM NSAFSCRAIG DVDLNKSEPW  60
DLPWKAKMGE KEWYFFCVRD RKYPTGLRTN RATESGYWKA TGKDKDIYRG KSLVGMKKTL  120
VFYRGRAPKG EKSDWVMHEY RLEGKLSALN LPKTAKNEWV ICRVFQKNAN GKKVDISGIS  180
KFGHSILPPL TDSSPFKGEI KRDVQTVSNV PCFSTAMDSQ RKLEPMASLS SSSSYPVIPN  240
PQTNSVYSAP NLQFPDCVLL QEQQSLLRTL LQTVNGGNPR EPFKTERDKI SCISQETCLT  300
TDINNEISSV FPNLEMGRRL FDNSQEAPPC SMAPFDLDGF WNYCN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-136	NAC family protein