PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022933553.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Nin-like
Protein Properties Length: 303aa    MW: 34942.2 Da    PI: 7.3836
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022933553.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK802.4e-25150199352
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     k +s +++s+yF +pi +AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl
  XP_022933553.1 150 KGLSRKTISEYFWMPISQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSL 199
                     77999******************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MISLFITQNP KLISFLHDFV ICSCALILVL RFIGCAPSPM PSLLNSFPFL LPLQFSNSFG  60
EEEMDPFPLS CHLSPLHFRN CNFGFQDSIF DVVPLFETCP NDSFLVLKDI EPNNTIISED  120
GGENEKKGLE RKEGRGKRKW RGERSSSPSK GLSRKTISEY FWMPISQAAK ELNVGLTLLK  180
KRCRELGIRR WPHRKLMSLQ TLIRNVKELE KEDGVKLRHV LEILENEKKL MEERPDLQLE  240
DNTKRLRQAC FKANYKKKRL SGTNNSSATR VHQDDDEEEE DEEMKYLLAD CSFSFTGGSL  300
LLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.13e-53Nin-like family protein