PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022933337.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRAS | ||||||||
Protein Properties | Length: 452aa MW: 51177.2 Da PI: 5.9075 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 314.4 | 2.5e-96 | 68 | 451 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 +lL ecA+a+s++d ++++++L+ l+elasp+gd+ q++a+yf++AL + ++++ ++yk+l + ++++++ +++l+ f+e+sP+ +f+h++ XP_022933337.1 68 TLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALFCKATETGLTCYKTLVAIADKNHSFDSSLKLILKFQEASPWTTFGHVA 162 6899**********************************************************9999998888888888888************** PP GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledlel 191 N aIlea+ege+++HiiD++ + ++QWp+Ll++La+R++++p+l++T+v ++ k ++e+g+r++kfA+ +gvpfefn++ ++l+dl+ XP_022933337.1 163 SNGAILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTT-TTIVKSLMKEIGQRMEKFARLMGVPFEFNPItNLENLTDLTK 256 ***************************************************9.6679999***********************94455******* PP GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerik 284 e+L+v+++Ea+a+n++ +l r+ +e+ r++v++++ksl+P+v+++ve+ead ++++Fl+ f e+l++y+ fd+le+++ ++s+er + XP_022933337.1 257 EALKVEEDEAIAINCIGALRRVR-----IEE-RNNVVSMLKSLKPRVLTIVEEEADFisSKNNFLKCFEECLRFYTLYFDMLEESFVTTSNERLV 345 *********************97.....555.889*********************9867889******************************** PP GRAS 285 vErellgreivnvvacegae...rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee..............sgslv.lg 361 +Ere +r+iv ++ c ++e e++e+ ++W++rl+e+ F+ +++se++ +++k+ll+++k g+ + + + + v l+ XP_022933337.1 346 LERE-CSRSIVRLLGCDESEeqmGSEKREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYK-PGWALLRRaattatgkvherddDSCGVyLT 438 ****.89*********988832245899999********************************9.6655553333444455555555777777** PP GRAS 362 WkdrpLvsvSaWr 374 Wk++p+v+vSaW+ XP_022933337.1 439 WKEEPVVWVSAWK 451 ************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 452 aa Download sequence |
MDITFFTAKE APTTFFNQSH DHHHHLHFSN LDMQSSTSHS SEYSPEQSPS AAAAAAATLA 60 ATGKWSSTLL KECARAISEK DSNKIHHFLW MLNELASPYG DSDQKMASYF LQALFCKATE 120 TGLTCYKTLV AIADKNHSFD SSLKLILKFQ EASPWTTFGH VASNGAILEA LEGETKLHII 180 DISNTLCTQW PTLLESLATR NDDTPHLKLT VVTTTTIVKS LMKEIGQRME KFARLMGVPF 240 EFNPITNLEN LTDLTKEALK VEEDEAIAIN CIGALRRVRI EERNNVVSML KSLKPRVLTI 300 VEEEADFISS KNNFLKCFEE CLRFYTLYFD MLEESFVTTS NERLVLEREC SRSIVRLLGC 360 DESEEQMGSE KREKGKQWSK RLKESAFSLA EFSEDVLDDV KALLKRYKPG WALLRRAATT 420 ATGKVHERDD DSCGVYLTWK EEPVVWVSAW KP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37650.1 | 1e-135 | GRAS family protein |