PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022932594.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family FAR1
Protein Properties Length: 250aa    MW: 28711.3 Da    PI: 7.0197
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022932594.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR192.36.4e-2986173291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p
  XP_022932594.1  86 FYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKITSGKWVVTKFVKEHTHPLSP 173
                     ******************************************9988..9**************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MEFGVDGDSE VVGNSTLVED SKPLDENETG VSSIERIFDH DQDEKIIQDS SGRNAILDSV  60
PGLPVVQGDE PYIGQEFENE AAAHAFYNAY ATRVGFVIRV SKLSRSRRDG TAIGRALVCN  120
KEGYRMPDKR EKIVRQRAET RVGCRAMILV RKITSGKWVV TKFVKEHTHP LSPGKSRRDC  180
IYDQYPNEHD KIRELSQQLA VEKKRSAMYK RHLEVIFEYI EEHNNNLSRK IQHIVDNVKE  240
MESIEQQNHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-96FAR1 family protein