PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022932556.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 334aa    MW: 35635.2 Da    PI: 6.1684
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022932556.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.7e-10184228554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L+el+P++      K + a++L + v+Y+k L
  XP_022932556.1 184 HSIAERLRRERIAERMKALQELVPSC-----NKTDRAAMLDEIVDYVKFL 228
                     99***********************8.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MAGIPSEGLG DDFFEQILAV QPGYAAGATG DVVSIPMALQ LGSGGSGGGD GLRGIAGLQG  60
GGGGGGMGMP LGLNLEQGFL RQERFRDELN NNNNNNNTTN NASSSSTASS GITERDSSVQ  120
HMNALFPSFG HLQQTQQLRP PPPPLHLHQP FHNQTNPGMV AAVPQPSQIR PRVRARRGQA  180
TDPHSIAERL RRERIAERMK ALQELVPSCN KTDRAAMLDE IVDYVKFLRL QVKVLSMSRL  240
GGAGAVAQLV ADVPLSSVEG EGIESGANQQ AWEKWSSDGT EQQVAKLMEE DVGAAMQFLQ  300
SKALCIMPIS LASAIFRTHQ ADPPIMVKPE MNTP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189194RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.38e-66bHLH family protein