PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022932374.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NF-YB | ||||||||
Protein Properties | Length: 228aa MW: 24602.3 Da PI: 6.6207 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 168.5 | 8.3e-53 | 72 | 168 | 1 | 97 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqd+++Pianv+rim+++lP++akis+daket+qecvse+isf+t+ea+++cqre+rkt++++d+lwa+++lGf+dy+epl+++l++yre e+ XP_022932374.1 72 VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTMFLNRYRESES 166 69*******************************************************************************************99 PP NF-YB 96 ek 97 ++ XP_022932374.1 167 DR 168 86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MECGGSSAAA GGGGGGGGGG DGFHSYRRQH SKPTSGLNHH LTNGATATGN SPATCHVPVT 60 GANNEQSQQC MVREQDQYMP IANVIRIMRR ILPSHAKISD DAKETIQECV SEYISFITGE 120 ANERCQREQR KTVTAEDVLW AMGKLGFDDY IEPLTMFLNR YRESESDRVR TEPILRRNVD 180 YVPQVGMMPP YGQAFPLGHT STGMFDAMGG YYGGGRSGGT SSGNGNQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21970.1 | 1e-65 | NF-YB family protein |