PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022932343.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 712aa MW: 77882.1 Da PI: 6.5414

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022932343.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.5	9.8e-32	309	365	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ +++++ei+Y+g+Hnh XP_022932343.1 309 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSH-EGHITEIIYKGTHNHV 365 7**************************************.*************6 PP
2	WRKY	103.2	1.4e-32	504	562	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gC+v+k+ver+++d k v++tYeg+Hnh+ XP_022932343.1 504 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCTVRKHVERASHDLKSVITTYEGKHNHD 562 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 712 aa Download sequence
MGRTDDNVAL IGDWVPPSPS PRTFFSAMQM LEEDVVGSRP TMDTTSTDKP EKIFLGSREH 60 TVSENAIARG GIPGVNSGDR SMEFGTVSEQ KFRGGLVERI AARAGFNAPR LNTENIRSTE 120 EVKSPYLTIP PGLSPTTLLD SPVFLSNSLA QQSPTTGKFP FVANVSYRSS TMMLEANNRG 180 NDNPFDDNSS SFAFRPRLES GSSFFHGAAS KVISLPQSCP RSVDPGLRSE NSYQPENRIN 240 HHPQMGLSTS CTERDDVGKN VLDDQRPYDS LCGGGGGEHS SPLDEQPDEG EQRGTVDSMA 300 SGGCGAPSED GYNWRKYGQK QVKGSEYPRS YYKCTHPNCQ VKKKVERSHE GHITEIIYKG 360 THNHVKPSPN RRASDSHINM QLDIPVQAGQ QNAEVPLWED SQKGTPDWMH SNLEVSSSAS 420 LGPEYGNHIE TVEAIDASST FSNDEDEDDR GTHGSITMGY EGEGDESESK KRKLDAYVTE 480 MSGATRAIRE PRVVVQTTSE VDILDDGYRW RKYGQKVVKG NPNPRSYYKC TNPGCTVRKH 540 VERASHDLKS VITTYEGKHN HDVPAARNSS HIGSCTSSPV TGQTSTATHH AHRPGPPQPQ 600 NNMPRFERPA FGLAGRQPMG TAHAHGFGFG MNQPGLRNLN LTMTMASAGQ AKLPVLPMHP 660 YLAQAHNVHE MGLLLPKGEP NLESTSDLGL NFSNGSTVYQ QIMSRLPLGP EM

Sequence ? help Back to Top

Protein Sequence Length: 712 aa Download sequence

MGRTDDNVAL IGDWVPPSPS PRTFFSAMQM LEEDVVGSRP TMDTTSTDKP EKIFLGSREH  60
TVSENAIARG GIPGVNSGDR SMEFGTVSEQ KFRGGLVERI AARAGFNAPR LNTENIRSTE  120
EVKSPYLTIP PGLSPTTLLD SPVFLSNSLA QQSPTTGKFP FVANVSYRSS TMMLEANNRG  180
NDNPFDDNSS SFAFRPRLES GSSFFHGAAS KVISLPQSCP RSVDPGLRSE NSYQPENRIN  240
HHPQMGLSTS CTERDDVGKN VLDDQRPYDS LCGGGGGEHS SPLDEQPDEG EQRGTVDSMA  300
SGGCGAPSED GYNWRKYGQK QVKGSEYPRS YYKCTHPNCQ VKKKVERSHE GHITEIIYKG  360
THNHVKPSPN RRASDSHINM QLDIPVQAGQ QNAEVPLWED SQKGTPDWMH SNLEVSSSAS  420
LGPEYGNHIE TVEAIDASST FSNDEDEDDR GTHGSITMGY EGEGDESESK KRKLDAYVTE  480
MSGATRAIRE PRVVVQTTSE VDILDDGYRW RKYGQKVVKG NPNPRSYYKC TNPGCTVRKH  540
VERASHDLKS VITTYEGKHN HDVPAARNSS HIGSCTSSPV TGQTSTATHH AHRPGPPQPQ  600
NNMPRFERPA FGLAGRQPMG TAHAHGFGFG MNQPGLRNLN LTMTMASAGQ AKLPVLPMHP  660
YLAQAHNVHE MGLLLPKGEP NLESTSDLGL NFSNGSTVYQ QIMSRLPLGP EM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-180	WRKY family protein