PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022932182.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 307aa MW: 35004.8 Da PI: 8.9794

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022932182.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.9	8.7e-06	143	162	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + C++C+ksF+r n++ H+ XP_022932182.1 143 FACSICNKSFNRYNNMQMHM 162 78*****************9 PP
2	zf-C2H2	11	0.0013	227	249	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+ k + ++H +++ XP_022932182.1 227 FMCRKCGKTLAVKGDWRTHEKNC 249 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MGLRNHMAQE NHITFIEWLK PSISLSSSLS SSSSSSSDRD LISPTTAQRC LPLFTEKDEE 60 RGRIRDRERK SLGIKEEDED LVKVEVGLHI GLPNVGDVPN FGDGNMNGFV KKEEMKKSFS 120 NFNTQGRFWI PTPAQILVGP MQFACSICNK SFNRYNNMQM HMWGHGSEYR KGPESLRGSQ 180 PAAMLRLPCY CCAHGCKNNI NHPRAKPLKD FRTLQTHYKR KHGSKPFMCR KCGKTLAVKG 240 DWRTHEKNCG KLWYCSCGSD FKHKRSLKDH IRSFGKGHNP TCPLDGFEDD KECLTGSDQE 300 HEFATHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-108	C2H2 family protein