PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022931440.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 246aa    MW: 27085.4 Da    PI: 5.484
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022931440.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.47.9e-30117175259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D + WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers +dp ++++tY+ eHnh 
  XP_022931440.1 117 SDSWGWRKYGQKPIKGSPYPRSYYRCSSSkGCSARKQVERSLSDPGAFVVTYSAEHNHA 175
                     79*************************998****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MEDWDLQAIV KGCNGSITPS RTATLMEDPN LVSFLIEKDE LLSSCSVYDE FEGLFGSSDD  60
SASASASAAA ISGLLRELKE PEKLHRKSQI AATKQKQSKK SRENRVVKEV KAEGVCSDSW  120
GWRKYGQKPI KGSPYPRSYY RCSSSKGCSA RKQVERSLSD PGAFVVTYSA EHNHAEPTRR  180
NALAGTTRKK FPAPENPRLD VILSPSNSMS VASVEEEQPM EGVAEGGVIM DLPFEFFSGL  240
EDFLFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-33WRKY family protein