PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022931242.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 810aa MW: 90063.2 Da PI: 5.9651 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.6 | 2.9e-20 | 90 | 145 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t+ q++e+e+lF+++++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k XP_022931242.1 90 KKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMK 145 688899***********************************************998 PP | |||||||
2 | START | 155.6 | 4e-49 | 292 | 517 | 3 | 206 |
HHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS...............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EE CS START 3 aeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv..............dsgealrasgvvdmvlallveellddkeqWdetla....ka 79 a + ++elvk+ ++ep+W + s e g+evl +e ++ +++ea r+s+vv+m++ +lv +ld + +W e ++ ka XP_022931242.1 292 AISSMAELVKMCRLTEPLWIRNS--ESGKEVLNVEEHARMfpwpmnlkqhlmneFRTEATRDSAVVIMNSITLVDAFLDAN-KWMELFPslvaKA 383 67899******************..99999999998888899***************************************.************* PP EEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEE CS START 80 etlevissg......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtw 166 +t++ iss g l lm+aelqalspl p R+ f+R+++q +g+w+ivd +ds + ++s+ R +++pSg++i++++ng+s+vtw XP_022931242.1 384 KTVQIISSSvsghasGSLRLMYAELQALSPLIPtREAHFLRCCQQnADEGSWAIVDLPIDSFHDSL-QHSFPRYRRRPSGCIIQDMPNGYSRVTW 477 *********************************************9999***********999987.9*************************** PP EE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 167 vehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206 veh++ +++ +h++++ +v+sg+a+ga +w+a lqrqce+ XP_022931242.1 478 VEHAEIEEKPIHQIFNNFVHSGMAFGAHRWLAILQRQCER 517 **************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 810 aa Download sequence |
MYGDCQVMSS NMGANMASSE SLFSSPIQNP NFNFISNFHH FPSIVPKEEN GLIMRGKEDM 60 ESGSGSEQLV EENPGIEMES NDNIMQNQKK KRYHRHTARQ IQEMEALFKE CPHPDDKQRL 120 KLSQELGLKP RQVKFWFQNR RTQMKAQQDR SDNVILRSEN DTLKNENYRL QTALRNIICP 180 SCGGQGILGE PSLDEQQLRL ENARLREQLE QVCSFTSRYT GRPLQGMSST APPLMQPSLD 240 LDMNIYSRQY TEAMVSSSEM MPLASMLPPD AAHFPEGGLL IEEEKTLAMD LAISSMAELV 300 KMCRLTEPLW IRNSESGKEV LNVEEHARMF PWPMNLKQHL MNEFRTEATR DSAVVIMNSI 360 TLVDAFLDAN KWMELFPSLV AKAKTVQIIS SSVSGHASGS LRLMYAELQA LSPLIPTREA 420 HFLRCCQQNA DEGSWAIVDL PIDSFHDSLQ HSFPRYRRRP SGCIIQDMPN GYSRVTWVEH 480 AEIEEKPIHQ IFNNFVHSGM AFGAHRWLAI LQRQCERIAS LMARNISDLG VIPSPEARQN 540 LMKLAQRMTR TFSLNISTSG GQSWTALSDS PDDTVRITTQ KIVEPGQPNG VILSAVSTTW 600 LPYPHYRVFD LLRDERQRSQ LEVLSNGNSL HEVAHIANGS HPGNCISLLR INVASNFSQH 660 VELMLQESCT DQSGSLVVFA TIDVDSIQLA MSGEDSSSIP LLPIGFSIVP VVDSTADGRL 720 ASSPPKDGAT NAAVVNSGCL LTVGLQVLAS TIPSAKLNLS SVTAINNQLC NTLHQINAAL 780 GCSSTQLENA NAAVDQNTAL PLPTQPPPKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46880.1 | 0.0 | HD-ZIP family protein |