PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022931183.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 207aa    MW: 23204.9 Da    PI: 5.0638
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022931183.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.000233557123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C  C++ F++   L  H++ H
  XP_022931183.1 35 YECVFCKRGFTTAQALGGHMNIH 57
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MDPNHIPNDD DQDPNSKTTT EEVEQANEMG SGRSYECVFC KRGFTTAQAL GGHMNIHRKD  60
RVKTKPNTTN NSPSKPEPFA HHSTLRPTTP LISTSHHHSF QTYFPTSSTW CLGSTTTTTT  120
TPSPDHQLAY VHNNLNINNN NNSSPQALNA FKENWTNISL PSRTPAPALI NHRDKRSDGN  180
VEDDDDDDDD DNNDDELDLE LRLGHDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.11e-13C2H2 family protein