PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022930317.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 252aa MW: 28954.3 Da PI: 10.6716 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.5 | 1.2e-08 | 96 | 141 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h +Er RR++ + +++eL ++lP+ +K++K +i+++A + I +L XP_022930317.1 96 RHMLNERMRREKHRRSYSELHSMLPSK-----TKNDKNSIVQMAARTIEEL 141 58889*********************9.....8***************988 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 252 aa Download sequence |
MDDGFPVEFW HTDLHWLDPP IPVSDPAPGQ ISAFVPYLPQ PTIGSRQKNN PITATTIIAT 60 YSENVHKRVI EYWRKQWQEK KKPAEMGDLE RERSHRHMLN ERMRREKHRR SYSELHSMLP 120 SKTKNDKNSI VQMAARTIEE LKASEGMLKK RNIELEMALS AKKRKQEKGT TPIRVAVANP 180 SSGINSMLGV LNLLKTVGVN AKAIHATFLD SRFSTHIAID SHMRAAEVER ALQMTLSEAE 240 RKLQRQMRGR FP |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 103 | 110 | MRREKHRR |
2 | 149 | 165 | KKRNIELEMALSAKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G43650.1 | 4e-38 | bHLH family protein |