PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022929541.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 307aa MW: 34783.6 Da PI: 4.7339 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.5 | 2.3e-18 | 56 | 108 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++ eq+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k XP_022929541.1 56 KRRLGVEQVKALEKNFEVENKLEPERKLKLAQELGLQPRQVAVWFQNRRARWK 108 5567889*********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 127.3 | 6.5e-41 | 54 | 146 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl eqvk+LE++Fe e+kLeperK +la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk++yd+lk + e+L++++++L +e++e XP_022929541.1 54 EKKRRLGVEQVKALEKNFEVENKLEPERKLKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKTNYDNLKLSFEALQNDNQALLKEIRE 146 69**************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MKRRSDSMAA LISISPTSDQ EQSPRNKNSN HVYEMEFQCM LDGFDEEELG HVSEKKRRLG 60 VEQVKALEKN FEVENKLEPE RKLKLAQELG LQPRQVAVWF QNRRARWKTK QLERDYGVLK 120 TNYDNLKLSF EALQNDNQAL LKEIRELKAK IQEDNSEMLV PADSENALIE QTKPEITDDF 180 SVPPARSFNN NGGEGDEPPT KDGSSDSDSS AILNEDYSPT AGVSSPGVLQ NNNHFMTGAI 240 PPSSPSIATA GVKLNRATTA LNYLQFQKGY QQTQMMFPKM EEHNFFGGEE ACNFFSDEQA 300 PTLHWWS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 55 | 84 | KKRRLGVEQVKALEKNFEVENKLEPERKLK |
2 | 103 | 111 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G40060.1 | 1e-74 | HD-ZIP family protein |