PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022929214.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Dof

Protein Properties

Length: 276aa MW: 30514.8 Da PI: 8.9376

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022929214.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.8	5.7e-39	22	80	4	62
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 lkcprC+stntkfCyynny+l+qPr+fCk+CrryWtkGGalrn+PvGgg+rknkk + XP_022929214.1 22 PPLKCPRCNSTNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNIPVGGGCRKNKKLK 80 5789****************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MKAPLQQQPI TQNDPDSQCS QPPLKCPRCN STNTKFCYYN NYNLTQPRHF CKTCRRYWTK 60 GGALRNIPVG GGCRKNKKLK SSSSNSNFLT GISPSIDFSA IGSGRSLFPC SCFSLGQTAA 120 PAPAAIPAAN YSSMGLYNLN DNTQQLASSI ESLSYLNQDL HWKLQQQRLG MIFGDHDQNQ 180 KFLQPISFQN LEPPKQEAFF NNNHPRKNST PAAATGTTTT TATEWIFGNN DSYHHHHQMS 240 ITSNSSRNIG GNAGGSGYNH NNGVEANWDD LLHFTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38000.1	5e-32	Dof family protein