PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022929146.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 579aa MW: 64365.4 Da PI: 6.4368

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022929146.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.3	6.3e-09	308	345	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + XP_022929146.1 308 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 345 554459******************************88 PP
2	BELL	107.8	6.8e-35	170	240	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 ++elqk+k+kL slleeV++rY++y++q+++v++sFeavag g+a++Y +lA+ka+S+hFr+Lkd i++qi XP_022929146.1 170 FMELQKRKTKLFSLLEEVERRYRHYCKQMKAVVASFEAVAGNGAARVYSALASKAMSKHFRSLKDGIVGQI 240 689******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MAGEDKSNEM VVGGFYYNSN QIQPGFGSST EPAEIFNLQV NNESGGGGGG GDDEFHHHLM 60 VVGPWGTAAA AAADSSLRCV FPCEANERPS HGLSLSLSST NPSSIGLQSF ELRTQQSSSA 120 IFQLRNSKFL APTQELLYEF CSLEITNDMN NRHQNQPISS TNSSLQSLDF MELQKRKTKL 180 FSLLEEVERR YRHYCKQMKA VVASFEAVAG NGAARVYSAL ASKAMSKHFR SLKDGIVGQI 240 QATKKAMGEK DPIAPGTTRG ETPRLRVIDQ ALRQQRAFHQ ISVMESHPWR PQRGLPERSV 300 SVLRAWLFEH FLHPYPSDVD KHILARQTGL SRSQVSNWFI NARVRLWKPM VEEMYLEETK 360 EQVEEIDNTN FNNMNNNRNN SFDGMMDFDD EIDGQRSIPT RVEDRKPTSD QLLRIDSEGL 420 SSIISNNSEK NDPRAMKAMQ NHQGQHVHNS HNHNFGRIAT DAFGMVELDF SSYNHDSGGV 480 SSYLNNNNNQ HFNNGSTSSV SLTLGLQQHA AGGRSVSEGV SIAFSPAAAA AATQSSIFFT 540 RDHIEECQPV QYSLLDGETT QNLPYRNLMG AQLLHDLAG

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MAGEDKSNEM VVGGFYYNSN QIQPGFGSST EPAEIFNLQV NNESGGGGGG GDDEFHHHLM  60
VVGPWGTAAA AAADSSLRCV FPCEANERPS HGLSLSLSST NPSSIGLQSF ELRTQQSSSA  120
IFQLRNSKFL APTQELLYEF CSLEITNDMN NRHQNQPISS TNSSLQSLDF MELQKRKTKL  180
FSLLEEVERR YRHYCKQMKA VVASFEAVAG NGAARVYSAL ASKAMSKHFR SLKDGIVGQI  240
QATKKAMGEK DPIAPGTTRG ETPRLRVIDQ ALRQQRAFHQ ISVMESHPWR PQRGLPERSV  300
SVLRAWLFEH FLHPYPSDVD KHILARQTGL SRSQVSNWFI NARVRLWKPM VEEMYLEETK  360
EQVEEIDNTN FNNMNNNRNN SFDGMMDFDD EIDGQRSIPT RVEDRKPTSD QLLRIDSEGL  420
SSIISNNSEK NDPRAMKAMQ NHQGQHVHNS HNHNFGRIAT DAFGMVELDF SSYNHDSGGV  480
SSYLNNNNNQ HFNNGSTSSV SLTLGLQQHA AGGRSVSEGV SIAFSPAAAA AATQSSIFFT  540
RDHIEECQPV QYSLLDGETT QNLPYRNLMG AQLLHDLAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-124	TALE family protein