PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022928513.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 248aa MW: 27723.4 Da PI: 9.544 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 101 | 1.7e-31 | 16 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lp+G+rF Ptdeelv +yLk+k+ + +l++ +vi+++d++ ++P+ +p + +++ +fFsk+++ +r t g+Wk+tgk+k ++++ XP_022928513.1 16 LPVGYRFCPTDEELVEHYLKRKAFDLPLPA-SVIPDFDVFLTDPSAFPGDF---KEKRFFFSKQRS------LLRRNTGCGIWKSTGKEKLIVNQ 100 799***************************.99***************554...346788888765......457999****************8 PP NAM 96 .kgelvglkktLvfykg.rapkgektdWvmheyrl 128 +++vgl+k+Lvfy+ ++++ t+Wvmheyrl XP_022928513.1 101 gINKVVGLRKSLVFYESkVSERTATTRWVMHEYRL 135 65678**********76256677899*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MEKTSNFVIN GGMMRLPVGY RFCPTDEELV EHYLKRKAFD LPLPASVIPD FDVFLTDPSA 60 FPGDFKEKRF FFSKQRSLLR RNTGCGIWKS TGKEKLIVNQ GINKVVGLRK SLVFYESKVS 120 ERTATTRWVM HEYRLPRSGS VSATTTPNST QLEMEDWAVY SLFQKRRRPK KKEGRKVAQG 180 SVMGLLRVEE NGGEFSQPCS SCSSGVTQVS SNGTESTDQE ESSSDLGLGL GLGLGFSSSY 240 YEAHVRGV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 164 | 171 | QKRRRPKK |
2 | 165 | 176 | KRRRPKKKEGRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14000.1 | 9e-40 | NAC family protein |