PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022928166.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 290aa MW: 32841.6 Da PI: 4.6904

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022928166.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.1	4.1e-20	73	126	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++ +eq++ Le+ Fe+++++ e++ +LAkklgL+ rqV vWFqNrRa++k XP_022928166.1 73 KKRRLANEQVQMLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWK 126 566899***********************************************9 PP
2	HD-ZIP_I/II	131.7	2.8e-42	72	163	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl++eqv++LE+sFeee+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd l+++ +++ ke++ L++e++ XP_022928166.1 72 EKKRRLANEQVQMLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDLLMSNYDSIVKENAVLKSEVA 163 69**************************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MESGRFLFNP PAYGGNMLCL GGAGGSDRFL RGRTMMSMSM NMSMQESPKG RPFFRSPDDL 60 YDDEYYDELY PEKKRRLANE QVQMLEKSFE EENKLEPERK SQLAKKLGLQ PRQVAVWFQN 120 RRARWKTKQL ERDYDVLKAS YDLLMSNYDS IVKENAVLKS EVASLTEKCV AKELDGGEAP 180 IPRTTLEPLL ADTAHVSAPH SGGSGRKAED RLSSGSDSSA VIDDNCLQLI DSGDSYFPSN 240 EYPQRAPLPP GLQMEHDDRN DNSNYLFSDM FAETNQQNQE GGPPAWWAWP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	129	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	4e-77	HD-ZIP family protein