PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022927814.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | bHLH | ||||||||
Protein Properties | Length: 498aa MW: 55197.7 Da PI: 8.0043 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.7 | 3.8e-12 | 368 | 413 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L+el+P+ +k + +++L +AveYIk Lq XP_022927814.1 368 SIAERVRRTKISERMRKLQELVPNM----DKQTNTSDMLDLAVEYIKGLQ 413 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 498 aa Download sequence |
MEADFQQQQH ILHEHQQQQP QMSSGLTRYR SAPSSYFRRL TDREFCDQFF NRPSSPETEQ 60 IFAQFMTSGS AGDGGGGPVC SSQNLDESQK NAQAGDITTE ANQQTPYVNN ETRAIHQQPS 120 IVNSNFLPAS STPSSYHQNL MKPPLPNQNL IPEAEGSGSM GVDLKPQIRT DGGRSSNLIR 180 QSSSPAGLFD YINLNASGYA ALTGLGNSGT GSSFNEETFF SSPSRLKNFS PRALPPHSSG 240 LMSPMAGIEK KKIRETNQDT KGFAGSQTSD YGSTSFPVGS WDECAVMSDN IVSRKALEND 300 DDKEKYSNLN ISDTQKVDPR NRPPMLARHL TLPSTAAEMN AVEKILQFSD SVPCKLRAKR 360 GCATHPRSIA ERVRRTKISE RMRKLQELVP NMDKQTNTSD MLDLAVEYIK GLQKQVQKSW 420 RDAESNSFKL SGEKNRKGID IVGCISIKMV PSSTSLSDEY FIRLVGFSSV FSFIECVKKG 480 FLYDFCIYIF FLSGSQTH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51140.1 | 4e-53 | bHLH family protein |