PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022927773.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 188aa MW: 21662.4 Da PI: 5.5617

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022927773.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	105.2	8.2e-33	11	126	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF Ptdeelvv++L++k++ +++ +vi+++ ++ ++Pw+L+ k+ +e ++wyf+s++ r+t++gyW+ g+d++v+++ XP_022927773.1 11 LPPGFRFYPTDEELVVHFLHRKAALLPCHP-DVIPDLALFPYDPWELDGKALGEGNQWYFYSRKTD--------ARVTANGYWNPLGRDEPVVAS 96 79***********************999.99**********977778899**9855........699***********998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 + e+vg+kk + f+ g+a kt+Wvmheyrl XP_022927773.1 97 aTAEVVGMKKYFLFHVGDA----KTNWVMHEYRL 126 67888******6655....79*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MDAAHTHNFT LPPGFRFYPT DEELVVHFLH RKAALLPCHP DVIPDLALFP YDPWELDGKA 60 LGEGNQWYFY SRKTDARVTA NGYWNPLGRD EPVVASATAE VVGMKKYFLF HVGDAKTNWV 120 MHEYRLYNAA AAAGRSSRRR GRPKRDYSKW VLCRVYEEEE EGAELSCLDE VFLTLDDLDE 180 ISLPDRLH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	146	RRGRPKRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	4e-80	NAC family protein