PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927559.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 314aa    MW: 35849.6 Da    PI: 10.2227
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927559.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM92.85.6e-29219552127
             NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                      ++++ew+fFs+r kky++g++++rat+ gyWkatgk+++v+s +++++g+k+tLvf++grapkge+t+W+mhey+
  XP_022927559.1  21 IQSDNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKS-GSNVIGTKRTLVFHTGRAPKGERTEWIMHEYN 95 
                     45789**************************************.99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MATRRALKSS RRSKFTTKSI IQSDNEWFFF SPRGKKYPNG NQTRRATDLG YWKATGKERN  60
VKSGSNVIGT KRTLVFHTGR APKGERTEWI MHEYNNKDKA QDFLVVCRLR RNNEFRQHSS  120
SNRASCSKMN LSSLQAHSGE QVDSTSESNQ KDVAEAALVE CSDGQKDYGS DDFYSDILKD  180
DIINLDTAPY DAASDLMPLD FHRSDTARES QTEANDGLEW LPSQGFANRR IRLKRREATK  240
AMKLDAVKIG GSRYKVEKVR FSSLELWRSR LMNTASSISI FGCYVRVVVI FFLLILLALF  300
MSRLEVFGMP KGLY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1229237RRIRLKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22290.11e-55NAC family protein