PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927106.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 582aa    MW: 64867.7 Da    PI: 7.1597
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927106.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS337.62.1e-1032105811374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal....ppsetseknsseelaalklfsevsPil 91 
                     l +lL++cAeav+ +d + a+ lL++l+ +a   g+++qR+a++f+++La rla  ++  y  +     ++++++++ +++  al+l +e+ P +
  XP_022927106.1 210 LLHLLVACAEAVACRDRSHASILLSELRANALVLGSSFQRVASCFVQGLADRLALVQPLGYVGFglpmMSRADHSSERKKKEEALNLVYEIYPHI 304
                     579***************************************************977766655432113444444446677778888******** PP

            GRAS  92 kfshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
                     +f+h++aN+ Ile +ege+ vH++D+++     +G QW +L+++La+ p+    lR+Tg+g     s ++++ +ge+L++ Aee+gv++e  + v
  XP_022927106.1 305 QFGHFVANSSILEVFEGENSVHVLDLGMAfglpYGHQWRSLIESLAECPNR-QLLRVTGIGL----SVNRYRLMGEKLKSHAEEFGVQVEVLA-V 393
                     *************************87762222678***********9876.89********....9************************99.7 PP

            GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                     + +le+l++++++++ gEal++ +++q+h +++es        +vL+++ +lsPk +v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+
  XP_022927106.1 394 EGNLENLRPQDIKLHDGEALVITSIFQMHGVVKESRGALT---SVLRMIYDLSPKALVLVEQDSNHNGPFFLGRFMEALHYYSAIFDSLDAMLPK 485
                     99*****************************977665555...8*************************************************** PP

            GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvS 371
                      +  r+k+E++++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+++p++  +++q k  + k+k s+ y+v ee+g+lvlgWk++p+v++S
  XP_022927106.1 486 YDTRRAKIEQFYFAEEIKNIVSCEGMARVERHERVDQWRRRMSRAGFQAAPIK--VMAQGKQWIGKFKaSESYTVVEEKGCLVLGWKSKPIVAAS 578
                     ***************************************************95..899**********9999*********************** PP

            GRAS 372 aWr 374
                     +W+
  XP_022927106.1 579 CWK 581
                     **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 582 aa     Download sequence    
MLPISYVNSL HLYHTIRPSG RNKNKRKKGN LVNSAQQCYN NRPHPVFYNF LSVPSGNDTH  60
SPSMASDADG GSFLSTDFRK EAEEVVDHSG TAHELCLPHR RHCLSLMDDT AASRWVISFS  120
DEFRHHKKFK LEPDSIAIDD GGGSSAHGST SLSLSRSSSS DSLSTGFRAH IWTYNQRYVA  180
AEAVEEAAAA IINAEESAAE EDASADGMRL LHLLVACAEA VACRDRSHAS ILLSELRANA  240
LVLGSSFQRV ASCFVQGLAD RLALVQPLGY VGFGLPMMSR ADHSSERKKK EEALNLVYEI  300
YPHIQFGHFV ANSSILEVFE GENSVHVLDL GMAFGLPYGH QWRSLIESLA ECPNRQLLRV  360
TGIGLSVNRY RLMGEKLKSH AEEFGVQVEV LAVEGNLENL RPQDIKLHDG EALVITSIFQ  420
MHGVVKESRG ALTSVLRMIY DLSPKALVLV EQDSNHNGPF FLGRFMEALH YYSAIFDSLD  480
AMLPKYDTRR AKIEQFYFAE EIKNIVSCEG MARVERHERV DQWRRRMSRA GFQAAPIKVM  540
AQGKQWIGKF KASESYTVVE EKGCLVLGWK SKPIVAASCW KC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.15e-71GRAS family protein