PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926979.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 247aa    MW: 27162.3 Da    PI: 9.5935
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926979.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-192170255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrdp++   + r++lg+f+taeeAa+a+++a++ ++g
  XP_022926979.1 21 HFRGVRKRP-WGRYAAEIRDPCK---KSRVWLGTFDTAEEAARAYDNAARGFRG 70
                    69*******.**********854...5**********************98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MAPRDKAVPV KPNVGNLKEV HFRGVRKRPW GRYAAEIRDP CKKSRVWLGT FDTAEEAARA  60
YDNAARGFRG AKAKTNFPLP SDDLLNLNNK INNNNQSPSQ SSTVESSSRE QALMVDSSPL  120
NHNLGHGISG LAANGSITFP FQRYQIPVIR DALLARAMPP SNHVLCFDAA LRAGVIKSHP  180
HHQNQRLRFD HHHEAVSNFR REFGCGGGVQ SDSDSSSVVD MNSQDMEPRR GGGGVDFDLN  240
FPPPESA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.16e-27ERF family protein