PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926923.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 462aa MW: 50710.7 Da PI: 7.1192

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926923.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.4	4.6e-15	252	303	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022926923.1 252 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 303 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MNSSSSSNSS SSSSSSSSSS SSNWLAFSLS NNPNSLSLFH HPNPPDLSIF SPKLEDFLRG 60 ASTPPPLPPP FQFSPHQTPL TYCEESEICD SDLKTIAASF LRGSPSQFPE QHLHQHLHAP 120 PPHPLPDTLT NPPPPPPKKS VDTFGQRTSI YRGILMWVFI FLRLVLVIGR DLSLLPWMDS 180 HFSSVYLGGY DKEEKAARAY DLAALKYWGP TTTTNFPVSD YEKDLENMKN MTRQEFVASL 240 RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK 300 FRGLNAVTNF DISRYDVKSI ASSNLPIGGM SATKSKPTTD SAASEDREVH HSPVSSTATL 360 LPSHPNTSTL TFGMPPIKQD PSDQYWSMFG YNVPPPTSSS SFTMFQQPSN PASTMFPPVA 420 DLPPTASPPL PEGGAYEQHQ QFAAPIALSR ASLFQTPIFG IE

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MNSSSSSNSS SSSSSSSSSS SSNWLAFSLS NNPNSLSLFH HPNPPDLSIF SPKLEDFLRG  60
ASTPPPLPPP FQFSPHQTPL TYCEESEICD SDLKTIAASF LRGSPSQFPE QHLHQHLHAP  120
PPHPLPDTLT NPPPPPPKKS VDTFGQRTSI YRGILMWVFI FLRLVLVIGR DLSLLPWMDS  180
HFSSVYLGGY DKEEKAARAY DLAALKYWGP TTTTNFPVSD YEKDLENMKN MTRQEFVASL  240
RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK  300
FRGLNAVTNF DISRYDVKSI ASSNLPIGGM SATKSKPTTD SAASEDREVH HSPVSSTATL  360
LPSHPNTSTL TFGMPPIKQD PSDQYWSMFG YNVPPPTSSS SFTMFQQPSN PASTMFPPVA  420
DLPPTASPPL PEGGAYEQHQ QFAAPIALSR ASLFQTPIFG IE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57390.1	1e-106	AP2 family protein