PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022926674.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ARF | ||||||||
Protein Properties | Length: 709aa MW: 77259.6 Da PI: 7.767 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 74.8 | 9.8e-24 | 152 | 253 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d+ g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + ++ XP_022926674.1 152 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyS-QQRPSQELVAKDLLGIKWKFRHIYRGQPRRHLLTTGWSAFVNKKRLVSGDAVLFL--RGND 243 99****************************963.3445679************************************************..4489 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +el+++++r+ XP_022926674.1 244 GELRLGIRRA 253 999****996 PP | |||||||
2 | Auxin_resp | 106 | 4.3e-35 | 278 | 359 | 1 | 82 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +++a+s+k+ F+v+YnPra++s+Fv +++k++k++++++s+GmRf ++fet+d++ rr++G ++gv d+dp+rWp+S+WrsL XP_022926674.1 278 VVNAISSKTSFSVYYNPRATSSQFVLPFHKFLKSINHSFSAGMRFSLSFETDDAADRRCTGRITGVGDVDPIRWPGSRWRSL 359 689*****************************************************************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 709 aa Download sequence |
MAALIDLNTT EEDDAPSSAA SSASSSSASA LTSSPSPSLT SSICLELWHA CAGPLTSLPK 60 KGSLVVYFPQ GHLEQMQEFP ATAAYDLPPH ILCRVIDVQL HQAEAGSDEV YAQVSLFPEN 120 EPIEHKMQEE MTNDSEGEDF EGSEKTTTPH MFCKTLTASD TSTHGGFSVP RRAAEDCFPP 180 LDYSQQRPSQ ELVAKDLLGI KWKFRHIYRG QPRRHLLTTG WSAFVNKKRL VSGDAVLFLR 240 GNDGELRLGI RRAAQLKTGS AFSNICSQQL NSSSIMDVVN AISSKTSFSV YYNPRATSSQ 300 FVLPFHKFLK SINHSFSAGM RFSLSFETDD AADRRCTGRI TGVGDVDPIR WPGSRWRSLV 360 VRWDNVETKR HGRVSPWEIE PSGSVSVASN MVPPGLKRTR IGLSPTELEF PAPNGIGASD 420 FGESLRFQKV LQGQEILGYS TPIDGDNNIR HPPEKRRSFP GLHGSGIAIM RNGPRIPVTN 480 SETSSRGFMF DESFQFHKVL QGQEIYPSPF FGIATATNEV KASGGYGPVD SVPLSRSKDG 540 WPITMQSENF LTRSSIPSVQ VSSPSSVFMF QQSMVPVQSF NSYNRGNFTE QRTMNKSTSH 600 NSGTAFMTTS LGVQKQLALS HPSTTEPAFT GNKAGCRLFG FSLTEGKNVG NTDNASPATT 660 PINAGTASVL SSNSGLRCPL KSPLMSKVVG SNCTEGAVQY HFANCSTYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33860.1 | 0.0 | ARF family protein |