PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022926168.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 250aa MW: 28850.7 Da PI: 8.9714 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 138.8 | 3.4e-43 | 5 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lppGfrF Pt+eelv++yL +k++g + ++++i+ ++iy ++PwdLp+ +k +e++w+fF++r++++a+g r++r+t++gyWkatg XP_022926168.1 5 LPPGFRFYPTEEELVSFYLFHKLQGGTqdliRAVDQTIPLLNIYLFNPWDLPQfageVCKRDEEQWFFFIPRQESEARGGRPKRVTANGYWKATG 99 79***********************9977743344469999***********657765566888******************************* PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + v+s+ +++ +g+k+++vfy+grapkg+kt+W m+ey+l XP_022926168.1 100 SPTYVYSSnTHRSIGVKRSMVFYNGRAPKGTKTQWKMNEYKL 141 ******9866778***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MADSLPPGFR FYPTEEELVS FYLFHKLQGG TQDLIRAVDQ TIPLLNIYLF NPWDLPQFAG 60 EVCKRDEEQW FFFIPRQESE ARGGRPKRVT ANGYWKATGS PTYVYSSNTH RSIGVKRSMV 120 FYNGRAPKGT KTQWKMNEYK LIGYPKLSLC RIYKKSKSLR AFDRRPQPPP LEAPIPPKQC 180 LETQHNAGDQ FADDQKLPNP PLTVERASSP ESFSSGDGHG EAATTNYNMQ LKMEVDNYEL 240 VWDWSRLNWL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 5e-64 | NAC family protein |