PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022925294.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 292aa    MW: 32077.5 Da    PI: 8.461
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022925294.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.00012226248223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +Cp Cg  Fs+ s+L  H  + H
  XP_022925294.1 226 QCPQCGAKFSSVSSLIDHVEKvH 248
                     7*****************99888 PP
2zf-C2H2157.1e-05265286323
                     ETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                     Cp+C++ F ++  L+ Hi + H
  XP_022925294.1 265 CPKCSRGFVDPVALVEHIEReH 286
                     ******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MGTPEFPNLG KHCSFEDCKQ IDFLPFTCDC CHQVFCLEHR SYNRHSCPKT DRRDVTVVIC  60
PLCAKGVRLI PDQDPNITWE IHVNTECDPS NYDKVTKKKK CPVPGCRELL TFSNTIKCRD  120
CLVDHCLKHR FGPDHKCSGP KKPEPAGFPF VGLLSRSRKE EKGPKRALPP TTSSSSWTTS  180
LLNAASSVKA SAEASMTKLS NEINHAWKTK SSSSSSNGSA NGQVEQCPQC GAKFSSVSSL  240
IDHVEKVHEK GGNRPGAKKV VIDACPKCSR GFVDPVALVE HIEREHGGTS RA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-117C2H2 family protein