PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022924178.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 328aa MW: 36738.8 Da PI: 8.4624 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 177.1 | 4.9e-55 | 17 | 143 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL+kkv + ++++ + i evd++k+ePwdLp k+k +e ewyfF+ rd+ky+tg r+nrat+sgyWkatgkdke+++ XP_022924178.1 17 LPPGFRFHPTDEELISQYLCKKVMDANFSC-KPIGEVDLNKSEPWDLPWKAKMGEGEWYFFCLRDRKYPTGLRTNRATESGYWKATGKDKEIYR- 109 79****************************.88***************88889999**************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfy grapkgek++Wvmhe+rle XP_022924178.1 110 GKTLVGMKKTLVFYGGRAPKGEKSNWVMHEFRLE 143 999****************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MEENMTASVH DESQIVLPPG FRFHPTDEEL ISQYLCKKVM DANFSCKPIG EVDLNKSEPW 60 DLPWKAKMGE GEWYFFCLRD RKYPTGLRTN RATESGYWKA TGKDKEIYRG KTLVGMKKTL 120 VFYGGRAPKG EKSNWVMHEF RLEGKPSAVN LPSTAKNEWV ISRVFQKSCG GKKVHLSGLV 180 KLGSSSSALP PLKDSSSSSI KINELAHVPC FSNTMDSSQR TLPKITDCSF NFSCFLPTIF 240 PRNTQPTSLY NPQAISLPLN LQFPNMAGTF KPEGERISVS QETGLTTDMN NEISSVVSNL 300 EMGRLAFENQ DNPSASTVPM NPHIAWNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 1e-122 | NAC family protein |