PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022923799.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 555aa    MW: 62777 Da    PI: 5.8577
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022923799.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.53.1e-15431181596
                     -EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  15 rlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                      + +p  fa++  +++   +k+++led+ g++W+v++  +++ g+  +++GW+ F +++ L+ gDfv+F ++   +  ++v++
  XP_022923799.1  43 VVFFPPIFASTVlKLV---NKKVVLEDSLGQQWKVTV--SNCEGSLAFQEGWSAFSSEHSLEIGDFVIFNHIM--DLYFNVSI 118
                     3678999998887666...468***************..*******************************765..44336665 PP
2B342.41.2e-134705511797
                     E--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3  17 vlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                      lp +f   +     ++e++k + l+d+s r W + +     ++  vlt+GW+ F+ an++++gD ++F+++++ e+e++v+++
  XP_022923799.1 470 ELPMTFHLPCsrgRRNPENKKVVFLRDPSKRLWPILY--HEMPNVQVLTSGWEAFCCANRIESGDECLFHVKDELEREYNVSIR 551
                     56666633334446667788899**************..9******************************99888888999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 555 aa     Download sequence    
MSSKVEACPE CTQRCLRFHR KTGNSSSVTS FFKVMFGDRF SEVVFFPPIF ASTVLKLVNK  60
KVVLEDSLGQ QWKVTVSNCE GSLAFQEGWS AFSSEHSLEI GDFVIFNHIM DLYFNVSIYT  120
KTGCEKVWFA EKSYTRKRIR STCPVLEITN EGLSNPQASS PSVGSGSNVT LSQDKFHVAG  180
YQNMNVYQGK RRKYQSNDEW HGPLDIVDDS YCLIDRNKDV GPEENRSPLF NLFSMEMQMV  240
NSCINENSTN KAAQDEINPN CASSSQNTII SVGPVNSVPV DIRGDMEVLP SNVSANKIND  300
KRQCFEEADI KMSVSDKDPC HDRTIEVPFI SSATNSDRNV EPFCDMPLKI IRDYQNVPAM  360
CNTASTITRH DQGSSVKQEY PPNSLKVKKC LHGDEKKIIK MEPLEIKTEV NNCGDFIEQI  420
LEPKVIKEEF LETSNQSGRE INDTTDNADP IGTPARISCV VAKDTLSFLE LPMTFHLPCS  480
RGRRNPENKK VVFLRDPSKR LWPILYHEMP NVQVLTSGWE AFCCANRIES GDECLFHVKD  540
ELEREYNVSI RKCKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.15e-10B3 family protein