PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022923796.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 1512aa MW: 169374 Da PI: 8.6884

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022923796.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00022	1421	1444	2	23
EET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirtH 23 +Cp Cgk F ++ +L++H r+H XP_022923796.1 1421 VCPvkGCGKKFFSHKYLVQHRRVH 1444 69999*****************99 PP
2	zf-C2H2	11.8	0.00074	1480	1506	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H XP_022923796.1 1480 YVCAepGCGQTFRFVSDFSRHKRKtgH 1506 899999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1512 aa Download sequence
MAATALAAEP PQEVFSWLKT LPLAPEYHPT LAEFQDPISY IFKIEKEASK FGICKIVPPV 60 SPSPKKTVIV NFNRSLAARA PCSDTSDSKS PPTFTTRQQQ IGFFPRKTRP VQKSVWQSGE 120 YYTFQQFEAK AKSFEKSYLK KCAKKGGLSP LEIETLYWRA TLDKPFSVEY ANDMPGSAFV 180 PVNAKMLREA GEGTTLGETA WNMRGVSRAK GSLLKFMREE IPGVTSPMVY VAMMFSWFAW 240 HVEDHDLHSL NYLHMGAGKT WYGVPRDAAV AFEEVVRVQG YGGEINPLVT FAVLGEKITV 300 MSPEVLVSAG VPCCRLVQNA GEFVVTFPRA YHTGFSHGFN CGEAANIATP EWVRLAKDAA 360 IRRASINYPP MVSHFQLLYD LALSSRSPLC TGAEPRSSRL KNKRKSEGEA VIKELFVQNI 420 VENNSLLDIL GRGASVVLLP PGSSDSIYSR QRIGSHPRAK SRFPVGFCSS KEETKSSQSF 480 DYDNLTLENS QGMNQVKGFY SANRLYSTLS ERNTENLCDS RSKTSNGSNE RGGNVLSDGL 540 SDQRLFSCVT CGILSFACVA IVRPREQAAR YLMSADCSFF NDWAVGSGIA IRDGHAVSSQ 600 QISNSGKRDT CVSDGLYDVP VQAVNRQLPI ADGSYKANLS TEKRNETSAL GMLALAYGHS 660 SDSEEDNAEA DAALNPGDAK LTVCSSGNQY QYDNSGLTSS ENCKNTATLD HNASSFGINA 720 TDQMHFQIND YEEFGQARCS SESEMDGIGS TKKNGLSPRY QDLHVNDRSS LDADTEKPTF 780 DESTEPVEIE NMPFAPDIDE DSSRLHVFCL EHAKEVEQQL RPIGGAHILL LCHPDYPKME 840 AEAKLVAQEL SMDHMWTDTT FRGATEDEER RIQLALDSEE AIPGNGDWAV KLGINLFYSA 900 NLSHSPLYSK QMPYNSVIYN AFGRSATPNA SGKPKVYQRR TAGKLKRIVA GKWCGKVWMS 960 NQVHPLLAKQ DPQQEDVDVF HSWTMPDEKF DRKSENVRKN ETVMVNRKSA GKRKMTRGSG 1020 TAKKMKPRES EDMVSDDSVE DCVDQHHKIH RNKRYKFVEI NDAMSDDSVE DDSCGKHGGV 1080 SISKGVTYCR TYDTGSEDSL GDRRNQQHRG FSGFKLPKWG EIEPAVSDDS LEHDSSRHRE 1140 QHTRIPRSKQ TNILKKNVVS HDIRDDSFLW HHQRTSRSKK AKSIESEDVS EDSVENDSHQ 1200 HRSRPQRKPA KPTSREDVFS DDPDEDDNSL LQHRRNMQFN TSDNQLDDSV NQYRRRVLRS 1260 KPVKAETISQ MKQEILRSAK RGASQTLKEE FAQSLKCGGR HTSNLETPQP RIQHATNRHG 1320 KQAKRNSKST DLESENEQPG GPSTRLRKRT LKPTKLSEAK LKDKKPISKK KVKNSSSLKT 1380 PAGRRDSKAA GDEESEYLCD IEGCNMSFGS KQELVVHKRN VCPVKGCGKK FFSHKYLVQH 1440 RRVHMDDRPL KCPWKGCKMT FKWAWARTEH IRVHTGARPY VCAEPGCGQT FRFVSDFSRH 1500 KRKTGHSTKK GR

Sequence ? help Back to Top

Protein Sequence Length: 1512 aa Download sequence

MAATALAAEP PQEVFSWLKT LPLAPEYHPT LAEFQDPISY IFKIEKEASK FGICKIVPPV  60
SPSPKKTVIV NFNRSLAARA PCSDTSDSKS PPTFTTRQQQ IGFFPRKTRP VQKSVWQSGE  120
YYTFQQFEAK AKSFEKSYLK KCAKKGGLSP LEIETLYWRA TLDKPFSVEY ANDMPGSAFV  180
PVNAKMLREA GEGTTLGETA WNMRGVSRAK GSLLKFMREE IPGVTSPMVY VAMMFSWFAW  240
HVEDHDLHSL NYLHMGAGKT WYGVPRDAAV AFEEVVRVQG YGGEINPLVT FAVLGEKITV  300
MSPEVLVSAG VPCCRLVQNA GEFVVTFPRA YHTGFSHGFN CGEAANIATP EWVRLAKDAA  360
IRRASINYPP MVSHFQLLYD LALSSRSPLC TGAEPRSSRL KNKRKSEGEA VIKELFVQNI  420
VENNSLLDIL GRGASVVLLP PGSSDSIYSR QRIGSHPRAK SRFPVGFCSS KEETKSSQSF  480
DYDNLTLENS QGMNQVKGFY SANRLYSTLS ERNTENLCDS RSKTSNGSNE RGGNVLSDGL  540
SDQRLFSCVT CGILSFACVA IVRPREQAAR YLMSADCSFF NDWAVGSGIA IRDGHAVSSQ  600
QISNSGKRDT CVSDGLYDVP VQAVNRQLPI ADGSYKANLS TEKRNETSAL GMLALAYGHS  660
SDSEEDNAEA DAALNPGDAK LTVCSSGNQY QYDNSGLTSS ENCKNTATLD HNASSFGINA  720
TDQMHFQIND YEEFGQARCS SESEMDGIGS TKKNGLSPRY QDLHVNDRSS LDADTEKPTF  780
DESTEPVEIE NMPFAPDIDE DSSRLHVFCL EHAKEVEQQL RPIGGAHILL LCHPDYPKME  840
AEAKLVAQEL SMDHMWTDTT FRGATEDEER RIQLALDSEE AIPGNGDWAV KLGINLFYSA  900
NLSHSPLYSK QMPYNSVIYN AFGRSATPNA SGKPKVYQRR TAGKLKRIVA GKWCGKVWMS  960
NQVHPLLAKQ DPQQEDVDVF HSWTMPDEKF DRKSENVRKN ETVMVNRKSA GKRKMTRGSG  1020
TAKKMKPRES EDMVSDDSVE DCVDQHHKIH RNKRYKFVEI NDAMSDDSVE DDSCGKHGGV  1080
SISKGVTYCR TYDTGSEDSL GDRRNQQHRG FSGFKLPKWG EIEPAVSDDS LEHDSSRHRE  1140
QHTRIPRSKQ TNILKKNVVS HDIRDDSFLW HHQRTSRSKK AKSIESEDVS EDSVENDSHQ  1200
HRSRPQRKPA KPTSREDVFS DDPDEDDNSL LQHRRNMQFN TSDNQLDDSV NQYRRRVLRS  1260
KPVKAETISQ MKQEILRSAK RGASQTLKEE FAQSLKCGGR HTSNLETPQP RIQHATNRHG  1320
KQAKRNSKST DLESENEQPG GPSTRLRKRT LKPTKLSEAK LKDKKPISKK KVKNSSSLKT  1380
PAGRRDSKAA GDEESEYLCD IEGCNMSFGS KQELVVHKRN VCPVKGCGKK FFSHKYLVQH  1440
RRVHMDDRPL KCPWKGCKMT FKWAWARTEH IRVHTGARPY VCAEPGCGQT FRFVSDFSRH  1500
KRKTGHSTKK GR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein