PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022923480.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 296aa MW: 33365.3 Da PI: 9.6202

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022923480.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.1	0.0013	74	96	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C++sF + L H++ H XP_022923480.1 74 HKCKLCSRSFVNGRALGGHMKAH 96 79******************998 PP
2	zf-C2H2	15.3	5.7e-05	196	218	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C ksF+++ L H +++ XP_022923480.1 196 FRCGKCRKSFRSNRALFGHRKVC 218 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MKRSIKNHNF GVCGCLFGGG MLVTYSFLST FQLPQSLPSL LHLPRQRKKQ SFFFFFFFFF 60 LLCFCNRATM AESHKCKLCS RSFVNGRALG GHMKAHLATF SIEHENPIKT LRSPDQEMLW 120 ISTAQDRESE TESKNPTRRR SKRTRRFKSE SPPSSEPASS ISDTSPEEDV AICLVMLSME 180 QGKEQSRTPV TVGKSFRCGK CRKSFRSNRA LFGHRKVCRN EGEEDGINGG EWKIFKCCYC 240 CKVFGSGQAL GGHKRSHLQG SIRAAIDGSS RKLEIGLDLN LPAPLEEDDY SVVSFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02030.1	4e-21	C2H2 family protein