PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022923441.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 364aa    MW: 41582.4 Da    PI: 9.4949
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022923441.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.00013119142123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     y C  Cg+ F +++ L++H +  H
  XP_022923441.1 119 YLCRVCGRNFYTNEKLVNHFKQiH 142
                     56*****************98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MIAFIRFRNL SFQFRKETEL NRRFHSGTNL KSTSPDSSCS AVAIFWDLDN KPPKSLPPYE  60
AAVKLKAAAA SFGAIRYMVA YANRHAFSYV PQVVREKRRE RKMLNQLERK GVIKSIEPYL  120
CRVCGRNFYT NEKLVNHFKQ IHESEHTKRL NQIESAKGSR RVKLLAKYSM KIQKYKNGAR  180
DVLTPKEGYG LADELKRAGF FVKTVSDKPE AADVELRNDM VEVMDRRRAE CLVLVSNDSD  240
FVNVLKEAKL RCLRTVVVGD LNDGPLKRNA DTGFSWKEIL MGKAKKEAVS VVGKWKDRDV  300
LKRLEWTYNP QLEKEVFGLD DDMGEDEDVD QGSVDENMTN GDSGAWWDLS SDAETEAVSS  360
RSCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12240.11e-144C2H2 family protein