PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922947.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 329aa    MW: 36239 Da    PI: 5.2342
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922947.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.85.5e-1582133155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h  +Er+RR+++N+ ++ Lr+l+P     + kK + a+i   +veYIk+Lq
  XP_022922947.1  82 QRMSHITVERNRRKQMNEHLSVLRSLMPCF---YVKKGDQASIIGGVVEYIKELQ 133
                     79***************************9...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MVDNLADFFQ QNEEFVDHTT IPQLEGYDLF SIFDSLENVA EFSMIEDDTE LETSPKTKRL  60
KMNGSAMAGV SSSEDANPDG AQRMSHITVE RNRRKQMNEH LSVLRSLMPC FYVKKGDQAS  120
IIGGVVEYIK ELQQVLQSLE AKKQRKVYSE VLSPRVVSSP RPLPMSPRKP PPLSPRLNLP  180
ISPRTPQPTS PYSKPPRLQQ PPTTDMANNN ISTVEPSPCN SSSTTNSSID NGNNGNNGNN  240
DLVANSKSGI AEVEVKFTGP NVVLKTVSAP IPGQAVKIIA ALEQLSLEIL HVKITTVDDT  300
MFNSFTIKIG IECQLSAEEL AHQIQQTFC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18394RMSHITVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.18e-45bHLH family protein