PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022922868.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 593aa MW: 65768.6 Da PI: 5.0749

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022922868.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.8	7.5e-52	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp GfrF+Ptdeel+++yL+ k++g++ ++ vi+evd++++ePwdLp + +k++++ew+fF+++d+ky++g+r +rat +g+Wkatgkd++++ XP_022922868.1 9 LPLGFRFRPTDEELIDYYLRSKINGNHEDV-CVIREVDVCNWEPWDLPdlSILKTKDREWFFFCPQDRKYPNGHRLKRATVAGFWKATGKDRKIK 102 699**********************999.78**********96447788999*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++l+g+kktLvfykgrapkg++t+Wv+heyr XP_022922868.1 103 S-GTKLIGMKKTLVFYKGRAPKGKRTNWVVHEYRT 136 .99****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MAVLTLNSLP LGFRFRPTDE ELIDYYLRSK INGNHEDVCV IREVDVCNWE PWDLPDLSIL 60 KTKDREWFFF CPQDRKYPNG HRLKRATVAG FWKATGKDRK IKSGTKLIGM KKTLVFYKGR 120 APKGKRTNWV VHEYRTTLKE LDGTNPGQNA FVLCRLFKKQ DESIEGSNGD EAEAAISSPT 180 TTESSPGPGD SHPEQILPLD SPSLQRQAEI SDGVLSETVE HTDGSVDIHG FDSYNVEMDP 240 HPDEERKFSG PENQPLDSKL YSPLHSQLQA ELGSSGLYYS DSNYLNYGAN PNAEQLQIGA 300 EDFDFIHQML DSFVYNSDDY ALEDQQESMS LSELPNNSMA SLDNRAFGKV EADTGKALQA 360 MPDFESSICL EVIDRKTPII DHMGTAAPEE GLLYNLSGSL QESYNYLSVV GNTDASTGIQ 420 RMSRRPRSVQ QPNEFSTFQG IAPRRLRLQR KLVAPSSCSS NTCSESSRWQ DDDPPSISSK 480 VKKPSENKTT GGDGGSVAAT VDVVKQPQVM PDADSGVGSS KASQEVSAKL VASDSPTIDF 540 LTGKRRLVTA LLPSILSYVS VVRLVVVALS IIFISIWKCR NREQRGYLVS PFC

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MAVLTLNSLP LGFRFRPTDE ELIDYYLRSK INGNHEDVCV IREVDVCNWE PWDLPDLSIL  60
KTKDREWFFF CPQDRKYPNG HRLKRATVAG FWKATGKDRK IKSGTKLIGM KKTLVFYKGR  120
APKGKRTNWV VHEYRTTLKE LDGTNPGQNA FVLCRLFKKQ DESIEGSNGD EAEAAISSPT  180
TTESSPGPGD SHPEQILPLD SPSLQRQAEI SDGVLSETVE HTDGSVDIHG FDSYNVEMDP  240
HPDEERKFSG PENQPLDSKL YSPLHSQLQA ELGSSGLYYS DSNYLNYGAN PNAEQLQIGA  300
EDFDFIHQML DSFVYNSDDY ALEDQQESMS LSELPNNSMA SLDNRAFGKV EADTGKALQA  360
MPDFESSICL EVIDRKTPII DHMGTAAPEE GLLYNLSGSL QESYNYLSVV GNTDASTGIQ  420
RMSRRPRSVQ QPNEFSTFQG IAPRRLRLQR KLVAPSSCSS NTCSESSRWQ DDDPPSISSK  480
VKKPSENKTT GGDGGSVAAT VDVVKQPQVM PDADSGVGSS KASQEVSAKL VASDSPTIDF  540
LTGKRRLVTA LLPSILSYVS VVRLVVVALS IIFISIWKCR NREQRGYLVS PFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24590.2	1e-90	NAC family protein