PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922829.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 249aa    MW: 28454.2 Da    PI: 8.7796
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922829.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.0004891113223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C+++++++ +L  H +  H
  XP_022922829.1  91 SCSVCPRVYPTSRLLSLHVSEaH 113
                     6*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MEVEPQSEFP YWKPFQRRFD PDSPFFASGN VEREILAKQV ALDLTEDEKF QLHNMVVDVG  60
RKIFCPIVGC GAHLKSLDDF EDHYNSRHTA SCSVCPRVYP TSRLLSLHVS EAHDSFFQAK  120
VARGYDMYEC LVEGCGLKFK SYKSRQQHLV DKHKFSASFE FFKKAPPSKK QRQKLYRKQV  180
LQPREETSIM EVENETMDGL ILGVSKLSTS DSTPSSVSFG RRHTRGLTFV PRAVQREKVS  240
DSSTAGSNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.11e-102C2H2 family protein