PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922554.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 315aa    MW: 35891.1 Da    PI: 5.1212
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922554.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.77.6e-151156146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqk 46
                     +g+WT+eEde+lv++v+++G+++W++  r  g + Rt+k+c++rw +
   XP_022922554.1 11 KGPWTAEEDEILVNYVNKFGPRDWSS-LRSKGlLPRTGKSCRLRWVN 56
                     79************************.66667788**********87 PP
2Myb_DNA-binding41.92.4e-1367108346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      ++++eE+   +++ +q+G++ W++Ia ++  gRt++++k++w +
   XP_022922554.1  67 KFSAEEERVVIELQAQFGNK-WAKIATYLE-GRTDNDVKNFWST 108
                      79******************.*********.***********65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MERQNGVNMK KGPWTAEEDE ILVNYVNKFG PRDWSSLRSK GLLPRTGKSC RLRWVNRLQP  60
NLKTGCKFSA EEERVVIELQ AQFGNKWAKI ATYLEGRTDN DVKNFWSTRR KRLERILQIP  120
PQKSQKNKQR SLEPQGLYEL PALEVPSSSS SQLDEQSSTW KDHLENAFQL GNSEMHKIPS  180
LSVQSNMLTM ENENQVFGTP STHMLAAPFD PFSHCCISQF THSSQEIGMF PDCHGLAPNH  240
APFNLQDVFE PGEPSETNSS LNFMSSSMPK EQEMKGESNL EVKNENSYQA TADDCFDDFT  300
ADLFDFFDQP PPSLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.15e-63MYB family protein