PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022922526.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 217aa MW: 24516 Da PI: 8.3316 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 79.8 | 1.8e-25 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n rqvtfskRr g++KKA+EL +LCda++a+i+fs +gkl++yss XP_022922526.1 9 KKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSS 59 689**********************************************96 PP | |||||||
2 | K-box | 53.3 | 1.2e-18 | 89 | 169 | 19 | 99 |
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 a+L++e +e+Rh++Ge+Le+L ++eL+qLe+ Le +l+++ ++K+e +l++ie ++ke l +en++Lr+++ XP_022922526.1 89 SVCANLREEFAAKTKELRHMKGEELEELGIEELKQLEKLLEIGLNRVIETKDEKFLKEIEAVKEKEALLTKENQRLRNQVR 169 45688999999999***************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MTRQKIQIKK IDNIAARQVT FSKRRRGLFK KAHELATLCD ADIALIVFSA SGKLFDYSSS 60 SMHELLGRHN KLPEVNNFCQ PLFQQMEKSV CANLREEFAA KTKELRHMKG EELEELGIEE 120 LKQLEKLLEI GLNRVIETKD EKFLKEIEAV KEKEALLTKE NQRLRNQVRA LNRDEQEQQA 180 VGVGGSSLGS KSITSNSSSS PNPSSQDCDD ISLKLGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 2e-42 | MIKC_MADS family protein |