PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922384.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 213aa    MW: 24883.6 Da    PI: 10.0483
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922384.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.61.1e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+s+
  XP_022922384.1  9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSN 59
                    79***********************************************95 PP
2K-box62.51.6e-21941692095
           K-box  20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     ++  + k++e L+ ++R+llG +L+s+s+ eLqqLe+qLe+sl+kiRs+K+++l+e+i +l++ ek l een aL+
  XP_022922384.1  94 DSFTITKKLEHLEVSKRKLLGGGLDSCSIDELQQLERQLERSLSKIRSRKYQILKEEIMKLKEEEKLLLEENAALQ 169
                     3335899******************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MVRGKTEMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSNF  60
SMNKTIDRYQ NRTKDLMSSN NTAVEDLQLE KELDSFTITK KLEHLEVSKR KLLGGGLDSC  120
SIDELQQLER QLERSLSKIR SRKYQILKEE IMKLKEEEKL LLEENAALQV RRKSSKKRET  180
KQRSESKEQD IMDVETELFI GLPERRTTTN GFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22950.12e-58MIKC_MADS family protein