PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922312.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family BBR-BPC
Protein Properties Length: 278aa    MW: 31098.8 Da    PI: 10.4539
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922312.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind304.34.4e-9312781301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 
                     md d+ + rn+gyyep+   k +l lqlms+i e+d k     r+  + +++ ++++++r           ++  rd ++++        ++kll
  XP_022922312.1   1 MDGDALNMRNWGYYEPS--GKAQLRLQLMSTIFEQDMKHflpgRNPSA-MINMNGVFHSRGsgvseppvpTNW-VRDGWINH-------NRDKLL 84 
                     99999988*******99..556689*************9999666655.************999999998888.89999999.......678999 PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     ++l+ + +        +++  +t+ ++ +q+    q +d++++  e+    +  i ++++e+ke+k+ kkrq++  pk++k kk++k       k
  XP_022922312.1  85 NMLPPNPT--------YSTHAETSAAQPVQM---LQAHDTSID--EM----VGRI-DEPSEKKETKQLKKRQNGGAPKVPKPKKPRK------AK 155
                     99995544........566678888888888...555566655..22....2333.457889999999*****************99......22 PP

       GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
                     ++ +s+ +++ka+kk++dlv+ng ++D+s++P+P+CsCtG+++qCY+WG GGWqSaCCttt+Sv+PLP+s krrgaRiagrKmS gafkk+LekL
  XP_022922312.1 156 NNDPSV-QQVKAPKKKMDLVINGLDMDISGIPIPICSCTGTPHQCYRWGYGGWQSACCTTTLSVHPLPMSEKRRGARIAGRKMSLGAFKKVLEKL 249
                     334443.579************************************************************************************* PP

       GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     a++Gy++snp+DL++hWA+HGtnkfvti+
  XP_022922312.1 250 AGQGYNFSNPIDLRSHWARHGTNKFVTIK 278
                     ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MDGDALNMRN WGYYEPSGKA QLRLQLMSTI FEQDMKHFLP GRNPSAMINM NGVFHSRGSG  60
VSEPPVPTNW VRDGWINHNR DKLLNMLPPN PTYSTHAETS AAQPVQMLQA HDTSIDEMVG  120
RIDEPSEKKE TKQLKKRQNG GAPKVPKPKK PRKAKNNDPS VQQVKAPKKK MDLVINGLDM  180
DISGIPIPIC SCTGTPHQCY RWGYGGWQSA CCTTTLSVHP LPMSEKRRGA RIAGRKMSLG  240
AFKKVLEKLA GQGYNFSNPI DLRSHWARHG TNKFVTIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.15e-93BBR-BPC family protein