PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022921381.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Nin-like
Protein Properties Length: 305aa    MW: 34355.7 Da    PI: 4.9691
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022921381.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK841.4e-26136186252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     +k +s e++s+yF++pi++AAk+L+v+lT+LK++CR++GI+RWPhRk+ sl
  XP_022921381.1 136 TKALSREVISEYFYMPITQAAKHLNVGLTLLKKRCRELGIRRWPHRKLMSL 186
                     799*********************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MGATWRPKCE AMAFEDPFPL SCHLSPLHCR TDNYSALDWN CNFGFPDSFF DVVPLLESCA  60
NNDSFFDPKD IDPFSSFISE DGGVGIWSEL ESEAFGVEEG GGENGNGGMG NEGTMMRKAK  120
RKCCRETSNG SGSASTKALS REVISEYFYM PITQAAKHLN VGLTLLKKRC RELGIRRWPH  180
RKLMSLQTLI KNVKELQKED GDQGVNKLSN VLKILENEKK LMEERPDLQL EDNTKRLRQA  240
CFKANYKKRK LSGTNNGSQY FSINGGMICR DDQEHGEEEE EEDDEEMKYL LMGCSFSSSI  300
GSPLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.13e-55Nin-like family protein