PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR97704.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 473aa MW: 52937.2 Da PI: 4.912

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR97704.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	88.9	4.3e-28	374	434	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDg++WrKYGqK++ g+++pr+YYrC+++ gC +kk+v+rs+edp+++++tY+g+H+++ RWR97704.1 374 DDGHSWRKYGQKDILGATYPRAYYRCAHRnvtGCAAKKQVQRSEEDPSIFHVTYQGDHTCN 434 8*************************99999************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MAVEAVVALL VDKLDKLLSR EAQLLGVHGE INWIREELNQ LRRFLKDADI KQKEDEDVRD 60 WMEDIRDICF DVDDVIDILG QGQAAQGRHG FVGRLKRRIS DQITRYKVGK EIERIKLNIK 120 GISRSRESYG IRETSSTQRL QEVSRCSVPP KIEIVITTVN DQLTNEERTR DIDEGRQEAS 180 SSSRNLQAHN PVSTLPGGPE EVGLQEEINT VGQQLIEEEP RLWDGTRDIS EGKLEASSST 240 PVFLITLLGD SEDVGLQEGI NTVGQQLIQE EPGPYDGTSD IDEGRLEASS SAPCLQADRQ 300 FSTLLGKSEE VGLKEEIDTV SEQLIKEKPS PCDGTGDIDE VPKWRYGSKK RKRQPNWSER 360 VRVSSGPGLE GPPDDGHSWR KYGQKDILGA TYPRAYYRCA HRNVTGCAAK KQVQRSEEDP 420 SIFHVTYQGD HTCNIQSSKI TGEASLLPQP FTLHQPLLGT APLYPEKGTM KKV

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MAVEAVVALL VDKLDKLLSR EAQLLGVHGE INWIREELNQ LRRFLKDADI KQKEDEDVRD  60
WMEDIRDICF DVDDVIDILG QGQAAQGRHG FVGRLKRRIS DQITRYKVGK EIERIKLNIK  120
GISRSRESYG IRETSSTQRL QEVSRCSVPP KIEIVITTVN DQLTNEERTR DIDEGRQEAS  180
SSSRNLQAHN PVSTLPGGPE EVGLQEEINT VGQQLIEEEP RLWDGTRDIS EGKLEASSST  240
PVFLITLLGD SEDVGLQEGI NTVGQQLIQE EPGPYDGTSD IDEGRLEASS SAPCLQADRQ  300
FSTLLGKSEE VGLKEEIDTV SEQLIKEKPS PCDGTGDIDE VPKWRYGSKK RKRQPNWSER  360
VRVSSGPGLE GPPDDGHSWR KYGQKDILGA TYPRAYYRCA HRNVTGCAAK KQVQRSEEDP  420
SIFHVTYQGD HTCNIQSSKI TGEASLLPQP FTLHQPLLGT APLYPEKGTM KKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23810.1	2e-35	WRKY family protein