PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR97437.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 270aa MW: 29673.1 Da PI: 4.8501

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR97437.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	32.1	2.3e-10	65	85	2	22
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 +D ++WrKYGqK++kgs++pr RWR97437.1 65 SDSWAWRKYGQKPIKGSPYPR 85 69******************9 PP
2	WRKY	31.2	4.3e-10	122	151	30	59
TT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 30 agCpvkkkversaedpkvveitYegeHnhe 59 ++Cp++k+vers+ dp++++itY +Hnh+ RWR97437.1 122 HSCPARKQVERSRVDPTMLVITYACDHNHP 151 68***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MEGRFITNPF ISDQEEPGTT PENGPFYIGK TSATSSPKRR RGAVAERRVV SVPIGEVEGS 60 TNPPSDSWAW RKYGQKPIKG SPYPRCVRPP SIVRLESNWT YPSPPAAMGG RLPRRRLILE 120 NHSCPARKQV ERSRVDPTML VITYACDHNH PWPTSRNPTK SDVKPAETEP AVLSGPAETD 180 PDDSFHDLEP DATMLAEDYS WFSDVASSPA KDPLLEGPIF AGTDADVATS VFPMGEEDES 240 LFGDLGELPE CSVVFRRCSL REAPWCGSTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29280.1	3e-44	WRKY family protein