PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR97429.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

HSF

Protein Properties

Length: 447aa MW: 50809.3 Da PI: 5.8462

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR97429.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.4	7.3e-36	13	103	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye+++d+++++++sws+n+nsf+v+++ ef++++LpkyFkhsnf+SFvRQLn+YgF+k++ ++ weF++++F +g+++ll++i RWR97429.1 13 FLTKTYEMVDDSSTNSVVSWSQNNNSFIVWNQMEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKIDPDQ---------WEFANDEFLRGQRHLLKNIY 100 9**************************************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k RWR97429.1 101 RRK 103 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MDGSQSSSGP APFLTKTYEM VDDSSTNSVV SWSQNNNSFI VWNQMEFSRD LLPKYFKHSN 60 FSSFVRQLNT YGFRKIDPDQ WEFANDEFLR GQRHLLKNIY RRKPIHSHSQ QHNQAQGSSS 120 GALSEAEKQE LEDEIEKLKQ DRNVLLLEKQ QRTQQQHGMD LQMQSLEERL HHMELRQRRM 180 MAFLKQIAQK PGFLSNLMAQ SETYNKKRRL PKADYFYDEA DAENNRIMAS HTAAREKTDF 240 ISVRVINMEP FEKMESCINS WENFFRGVSR ASGEEMYSGG MPCQLSAVVL TEMDVSSGDP 300 GINLQPPSPK LRSSSPPSRD SHSSPELTES TSYLDSPSYS PIQVHGDILP KASGIDVNTK 360 PAATEVQSSK EHVNVPHAAV TGVNDIFWEQ FLTEHPGSLD AEVQSEGQDT DGRSENKPAD 420 HGNFWWNRKN VDHLTEQMGQ LTPAGST

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MDGSQSSSGP APFLTKTYEM VDDSSTNSVV SWSQNNNSFI VWNQMEFSRD LLPKYFKHSN  60
FSSFVRQLNT YGFRKIDPDQ WEFANDEFLR GQRHLLKNIY RRKPIHSHSQ QHNQAQGSSS  120
GALSEAEKQE LEDEIEKLKQ DRNVLLLEKQ QRTQQQHGMD LQMQSLEERL HHMELRQRRM  180
MAFLKQIAQK PGFLSNLMAQ SETYNKKRRL PKADYFYDEA DAENNRIMAS HTAAREKTDF  240
ISVRVINMEP FEKMESCINS WENFFRGVSR ASGEEMYSGG MPCQLSAVVL TEMDVSSGDP  300
GINLQPPSPK LRSSSPPSRD SHSSPELTES TSYLDSPSYS PIQVHGDILP KASGIDVNTK  360
PAATEVQSSK EHVNVPHAAV TGVNDIFWEQ FLTEHPGSLD AEVQSEGQDT DGRSENKPAD  420
HGNFWWNRKN VDHLTEQMGQ LTPAGST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	7e-87	HSF family protein