PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR96641.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 268aa MW: 30395.9 Da PI: 5.0716

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR96641.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1.1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ ++ ++G ++W++ ++ g+ R++k+c++rw +yl RWR96641.1 14 KGPWTQEEDQILISYILRYGHENWRALPKQAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	52.3	1.3e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l RWR96641.1 67 RGNFSREEEETIIKLHELLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MVRAPCCDKI GLKKGPWTQE EDQILISYIL RYGHENWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF SREEEETIIK LHELLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRVKQNP 120 ATPETSTRSS METVECNVHV EIDSKPTDLS NHHTFQNSGP SSPQQQSSSD DSSSVTDSLS 180 NRTIDHLNSG MKEDENLWSE ALSIEKSEDS MVEYFAANAG DPQLQFPFSP DSLGGICSPL 240 GLTSTDDDMD FWLNIYMGAE VWPELPEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	5e-75	MYB family protein