PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR96410.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 418aa MW: 46019 Da PI: 6.5939

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR96410.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88	8.9e-28	141	195	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++++SHLQkYR++ RWR96410.1 141 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIDCLTRHNIASHLQKYRSH 195 5689***************.******************************86 PP
2	Myb_DNA-binding	39.6	1.2e-12	144	193	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ RWR96410.1 144 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGiDCLTRHNIASHLQKYR 193 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MLSVSPLTGP KDEVHEKESE KPPFSAVGVD DFSFDDIDFD DLFVGIDDGD VLPDLEVDSE 60 MFAELSAAGS DVNLSSCSSV EREDKDEKRE EGDRREEKRE GSVSRSEESP VTKTNSASSD 120 SNIGRKPATA QTKGLSQGKR KVKVDWTPEL HRRFVQAVEQ LGVDKAVPSR ILELMGIDCL 180 TRHNIASHLQ KYRSHRKHLL AREAEAVNWT QRRHVYGGSG GGGKRNMAPW IPPTIGFPPP 240 TPLHPFRPLH VWGHPTVDHS LIHVWPKHLV HSPSPPPPPP PTWVPPPPPP PPPADPSYWH 300 PPHQRGSKDG WVPNILTQGT PCFPQPLTTM KFSAPLVPGI PPHALYKPDN SIAIPSPHMD 360 SHLQFDSHPS KETVDAAVGD VLAKPWQPLP LGLKPPSMDS VLVELQRQGV PKVPSFCA

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MLSVSPLTGP KDEVHEKESE KPPFSAVGVD DFSFDDIDFD DLFVGIDDGD VLPDLEVDSE  60
MFAELSAAGS DVNLSSCSSV EREDKDEKRE EGDRREEKRE GSVSRSEESP VTKTNSASSD  120
SNIGRKPATA QTKGLSQGKR KVKVDWTPEL HRRFVQAVEQ LGVDKAVPSR ILELMGIDCL  180
TRHNIASHLQ KYRSHRKHLL AREAEAVNWT QRRHVYGGSG GGGKRNMAPW IPPTIGFPPP  240
TPLHPFRPLH VWGHPTVDHS LIHVWPKHLV HSPSPPPPPP PTWVPPPPPP PPPADPSYWH  300
PPHQRGSKDG WVPNILTQGT PCFPQPLTTM KFSAPLVPGI PPHALYKPDN SIAIPSPHMD  360
SHLQFDSHPS KETVDAAVGD VLAKPWQPLP LGLKPPSMDS VLVELQRQGV PKVPSFCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	1e-62	G2-like family protein