PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR96407.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 269aa MW: 30078.6 Da PI: 7.6768

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR96407.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	106.4	3.6e-33	49	186	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikev....diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyWkatgk 88 lp+G++F+P+d+e++ +Lk+k++g++++l + i+++ +i++++P++Lp v+ + + +fF+ +k+y+tg+rk+r+++ + +W++tgk RWR96407.1 49 LPAGVKFDPSDQEIL-GHLKRKATGDNHPLIDEfIPTLgeenGICYTHPENLP-GVSRDGLSRHFFHLPSKAYTTGTRKRRKVHtdedgsETRWHKTGK 145 799*********9.88*99996664422443311137******.555666799**************744446555788** PP NAM 89 dkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +++vls +g+++g kk++v+y g+++k+ekt Wvmh+y+l RWR96407.1 146 TRPVLS-DGKVMGYKKIMVLYnnYGKRQKPEKTYWVMHQYHL 186 **.999*******555799999********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MAGIPWNNDS NSNTTIHNER FKQNPTATCS NCGHQIHCQQ GGIHELPGLP AGVKFDPSDQ 60 EILGHLKRKA TGDNHPLIDE FIPTLGEENG ICYTHPENLP GVSRDGLSRH FFHLPSKAYT 120 TGTRKRRKVH TDEDGSETRW HKTGKTRPVL SDGKVMGYKK IMVLYNNYGK RQKPEKTYWV 180 MHQYHLGSEE DEKDGEIVVS KVFYQTQPRQ CGSGAKESVV EMDKGQVVYN SSCSSLITYD 240 QQNDHNGAGT IQLIAPNFLV HANGSSFLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28470.1	1e-103	NAC family protein