PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR96310.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 276aa    MW: 30294.6 Da    PI: 4.7911
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR96310.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.71.4e-2980138259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s  gCp++k+vers+ dp++++itY  +Hnh+
  RWR96310.1  80 SDSWAWRKYGQKPIKGSPYPRGYYRCSSWkGCPARKQVERSNVDPTMLVITYACDHNHP 138
                 69*************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MEDQFNTTPV ATDQDEPGIK PETGAGSAFY NEKVSATSSP KRRLADPEAD FHGNIRSRRR  60
AVEKRVVSVP IGDTEGAPPS DSWAWRKYGQ KPIKGSPYPR GYYRCSSWKG CPARKQVERS  120
NVDPTMLVIT YACDHNHPWP ISRNKPDPNP NSSAPATAEP KPPVAFSNLA DAEPAEKFAD  180
LETDSVLQAT DDFGWFSDMA SSSPTKDTLL ESPICGGSDA AVEAVIFPMR EEDESLFADL  240
GELPGCSPVF RRGFYEQVEE SRRCRLREAP CCGSTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.16e-64WRKY family protein