PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR96170.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 317aa    MW: 34866.6 Da    PI: 8.5447
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR96170.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.36.6e-33180237259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK vk+s++prsYYrCts++C+vkk+vers +dp++v++tYeg H+h+
  RWR96170.1 180 EDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCSVKKRVERSFQDPTTVITTYEGVHTHP 237
                 8********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MSGNKDPSRQ DYSHGNHGMG AIRFPFSNNP SIYSQPPCNP EIDQAIGNSH GYDPTSYMSF  60
TECLQASTGY GVLSKAFDLS CSSSEVLAPG DGGGTANELV ESSTGHGGNS ATPNSSVSSS  120
STEAVGEEDS ERSKKDQQPK GCGDGMERSK KVTKPRKKGE KRQREPRFAF MTKSEIDNLE  180
DGYRWRKYGQ KAVKNSPYPR SYYRCTSQKC SVKKRVERSF QDPTTVITTY EGVHTHPSPA  240
TLRGSTASML APSILTPTPS SVTNFHQDLF MQMPSTNFHQ GDPSSLYLQS LSHNQRLQLP  300
DYGLLQDVIP PFIRKQP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.15e-62WRKY family protein