PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95958.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 445aa MW: 49101.3 Da PI: 7.2958

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95958.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.8	4.3e-32	262	315	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ RWR95958.1 262 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 315 9****************************************************7 PP
2	Myb_DNA-binding	46.5	8.6e-15	263	314	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ RWR95958.1 263 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 314 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MELSSAQAPD LSLHISPPNN TPSSVCSNSM EHEPGIDLWP RCDSFKSTAN GARPNSAYTE 60 LSLANPIGSM DAETPWRRNT PRGVEGEHHQ SHLHHYHQHL NSHHRLNQVN HGVSLMEISE 120 GSRPIRGIPV YPNRSFPFVA LDHSREKDPK TRFYQMPYPS WSSSLCSSAP SPSSSLAPSA 180 PLIGGSLDSM GLLHASPSSV AYRMATGTRF NEFSTDPLKA HQLHHHHHHQ QFGLGASDAS 240 SHGMMRSKFV SKLPTKRSMR APRMRWTSTL HARFVHAVEL LGGHERATPK SVLELMDVKD 300 LTLAHVKSHL QMYRTVKTTD KPAASSGQSD GSGDDDFSPP AAASNDLNLR QLTEGRGSDG 360 SLQHDMDYFS TTTLWSNSSS RGAWVQTDSN NMERLRPATF SSQHGCEEND STPSKDSPGS 420 HLDIKNPNLE FTLGRPDWNG KEHDP

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MELSSAQAPD LSLHISPPNN TPSSVCSNSM EHEPGIDLWP RCDSFKSTAN GARPNSAYTE  60
LSLANPIGSM DAETPWRRNT PRGVEGEHHQ SHLHHYHQHL NSHHRLNQVN HGVSLMEISE  120
GSRPIRGIPV YPNRSFPFVA LDHSREKDPK TRFYQMPYPS WSSSLCSSAP SPSSSLAPSA  180
PLIGGSLDSM GLLHASPSSV AYRMATGTRF NEFSTDPLKA HQLHHHHHHQ QFGLGASDAS  240
SHGMMRSKFV SKLPTKRSMR APRMRWTSTL HARFVHAVEL LGGHERATPK SVLELMDVKD  300
LTLAHVKSHL QMYRTVKTTD KPAASSGQSD GSGDDDFSPP AAASNDLNLR QLTEGRGSDG  360
SLQHDMDYFS TTTLWSNSSS RGAWVQTDSN NMERLRPATF SSQHGCEEND STPSKDSPGS  420
HLDIKNPNLE FTLGRPDWNG KEHDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	9e-61	G2-like family protein